Clinical Other

Neuroinfectious Disease

Neuroinfectious Disease

What Do You Need to Know?

  • Bacterial meningitis: do NOT delay antibiotics for imaging — give vancomycin + ceftriaxone/cefotaxime + dexamethasone empirically; ADD ampicillin if age ≥50, pregnant, or immunocompromised (Listeria coverage); dexamethasone BEFORE or WITH first antibiotic dose reduces mortality in S. pneumoniae
  • HSV encephalitis: temporal lobe + fever + seizures = start IV acyclovir immediately — do NOT wait for PCR; most common sporadic fatal encephalitis
  • Brain abscess: central restricted diffusion is characteristic — pyogenic abscesses usually restrict; necrotic tumors usually do not. Not pathognomonic: some metastases / high-cellularity tumors can restrict.
  • HIV neurology: Toxoplasmosis (ring-enhancing, multiple, basal ganglia) vs. CNS lymphoma (single, periventricular, EBV+) — empiric toxo treatment first; biopsy if no response
  • PML: multifocal white matter lesions + NO mass effect + immunosuppressed = JC virus; natalizumab risk stratification by JCV antibody index
  • Neurosyphilis: Argyll Robertson pupil (accommodates but does NOT react to light) is pathognomonic; CSF VDRL is specific but NOT sensitive
  • CJD: rapidly progressive dementia + myoclonus + cortical ribboning on DWI = sCJD; RT-QuIC is now the most sensitive and specific CSF test
🚩 Don’t Miss — Test-Day Priorities
  • Bacterial meningitis empiric therapy: vancomycin + ceftriaxone for all adults; ADD ampicillin if ≥50, immunocompromised, or pregnant (Listeria); dexamethasone BEFORE or WITH first antibiotic dose for suspected pneumococcal — do NOT delay antibiotics for CT/LP
  • HSV-1 encephalitis: fever + AMS + focal seizures + TEMPORAL/INSULAR/ORBITOFRONTAL T2/FLAIR/DWI hyperintensity (often bilateral asymmetric, gyral enhancement) → start IV acyclovir 10 mg/kg q8h empirically; CSF lymphocytic with RBCs; PCR confirms; ≥50% develop epilepsy; anti-NMDAR encephalitis can follow
  • TB meningitis: subacute BASAL meningitis + cranial neuropathies (III, VI) + hydrocephalus + basal vasculitis infarcts; CSF lymphocytic + very low glucose + very high protein; RIPE × 12 mo + ADJUNCTIVE DEXAMETHASONE (improves survival)
  • Cryptococcal meningitis (HIV CD4 <100): amphotericin B + flucytosine induction → fluconazole consolidation/maintenance; SERIAL LPs (NOT shunt initially) for elevated ICP — ICP management drives survival
  • Toxoplasmosis vs PCNSL in HIV: toxo = MULTIPLE ring-enhancing lesions at basal ganglia + GW junction, serum IgG+ → empiric pyrimethamine + sulfadiazine; PCNSL = SINGLE periventricular, EBV+, thallium SPECT/PET avid — biopsy if no response to toxo therapy in 2 weeks
  • Neurocysticercosis: seizures + Mexico/Central America exposure + cysts at GW junction. 1–2 viable cysts: albendazole monotherapy × 10–14 d + corticosteroids started BEFORE antiparasitic. >2 viable cysts: albendazole + praziquantel + steroids. Single enhancing lesion: albendazole + steroids (NOT steroids alone). Calcified lesions: symptomatic/seizure management only — no antiparasitic
  • PML: JC virus reactivation in HIV / natalizumab / rituximab / ocrelizumab / fingolimod; multifocal SUBCORTICAL T2 hyperintensities, NO mass effect, NO enhancement; CSF JCV PCR; treat by REVERSING immunosuppression; watch for IRIS
  • Neurosyphilis: Argyll Robertson pupil (accommodates but does NOT react) + tabes dorsalis + general paresis; CSF VDRL specific but NOT sensitive; treat with IV penicillin G × 14 days — oral/IM benzathine does NOT penetrate CNS
  • Sporadic CJD: RPD + myoclonus + cerebellar/visual/pyramidal; MRI DWI cortical ribboning + basal ganglia (pulvinar sign in variant CJD); EEG periodic sharp wave complexes (1 Hz); CSF RT-QuIC (most sensitive/specific) > 14-3-3 + tau; fatal, no treatment
  • Lyme neuroborreliosis: BILATERAL CN VII palsy + painful radiculopathies + lymphocytic meningitis; ELISA + Western blot; CSF Lyme antibody index. Per 2020 AAN/ACR/IDSA: meningitis, cranial neuritis, and radiculoneuritis can be treated with oral doxycycline OR IV ceftriaxone/cefotaxime/penicillin G × 14–21 days; reserve IV therapy for parenchymal brain/spinal cord involvement or inability to take oral therapy.
🔍 Buzzwords & Pathognomonic FindingsClinical / CSF · Imaging / pathology · Treatment
Clinical / CSF
  • Fever + meningismus + AMS triad + photophobiabacterial meningitis
  • Argyll Robertson pupil (accommodates, does NOT react to light)neurosyphilis (tabes dorsalis)
  • Bilateral CN VII palsy + tick exposure + erythema migransLyme neuroborreliosis
  • Fever + focal seizures + behavioral change + temporal lobe signsHSV-1 encephalitis
  • Fever + flaccid asymmetric paralysis (polio-like) + parkinsonismWest Nile virus
  • HZ ophthalmicus → delayed contralateral hemiparesisVZV vasculopathy
  • CSF lymphocytic + very low glucose + very high protein, subacute courseTB or fungal meningitis
  • CSF India ink + cryptococcal antigen + HIV CD4 <100cryptococcal meningitis
  • CSF RT-QuIC positive + 14-3-3 + tau elevatedsporadic CJD
  • Rapidly progressive dementia + myoclonus + startleCJD
  • CSF VDRL reactive (specific not sensitive)neurosyphilis
  • Tabes dorsalis: sensory ataxia + lancinating pains + dorsal column atrophytertiary syphilis
Imaging / pathology
  • Bilateral asymmetric temporal + insular + orbitofrontal T2/FLAIR/DWI hyperintensity with gyral enhancementHSV-1 encephalitis
  • Basal meningeal enhancement + hydrocephalus + basal ganglia infarctsTB meningitis
  • Multiple ring-enhancing lesions at basal ganglia + GW junction in HIVtoxoplasmosis
  • Single periventricular homogeneous-enhancing lesion in HIV, thallium-avidPCNSL (EBV-driven)
  • Ring-enhancing lesion with restricted diffusion in CENTER + dark T2 capsulepyogenic brain abscess
  • “Star of Jerusalem” scolex within cyst at GW junction; multistage (vesicular → colloidal → granular → calcified)neurocysticercosis
  • Multifocal subcortical white matter T2 hyperintensities, NO mass effect, NO enhancementPML (JC virus)
  • DWI cortical ribboning + basal ganglia hyperintensitysporadic CJD
  • Pulvinar sign (bilateral posterior thalamic DWI hyperintensity)variant CJD
  • EEG periodic sharp wave complexes at ~1 Hzsporadic CJD
  • Spongiform vacuolation + prion protein deposition on biopsyCJD
  • Monophasic large confluent post-viral demyelinating lesions in childADEM
Treatment / pearls
  • Vancomycin + ceftriaxone + dexamethasone BEFORE/WITH first doseempiric bacterial meningitis (suspected pneumococcal)
  • Add ampicillin for age ≥50 / immunocompromised / pregnantListeria coverage
  • IV acyclovir 10 mg/kg q8h × 14–21 days, do NOT wait for PCRHSV encephalitis
  • RIPE × 12 months + adjunctive dexamethasoneTB meningitis
  • Amphotericin B + flucytosine induction → fluconazole + SERIAL LPs for ICPcryptococcal meningitis in HIV
  • Pyrimethamine + sulfadiazine + leucovorin (empiric, then reassess at 2 wk)CNS toxoplasmosis
  • Albendazole + steroids (steroids BEFORE antiparasitic); add praziquantel if >2 viable cystsneurocysticercosis (calcified lesions → symptomatic only)
  • IV penicillin G × 14 days (oral/IM does NOT penetrate CNS)neurosyphilis
  • Oral doxycycline OR IV ceftriaxone/cefotaxime/penicillin G × 14–21 daysLyme meningitis / cranial neuritis / radiculoneuritis (2020 AAN/ACR/IDSA); reserve IV therapy for parenchymal brain/cord disease
  • Reverse immunosuppression (stop natalizumab, restart ART)PML — watch for IRIS
  • Rifampin or ciprofloxacin or ceftriaxone for close contactsN. meningitidis chemoprophylaxis
  • Steroids/IVIG for monophasic post-viral demyelinationADEM
Bacterial Meningitis

CSF Profiles Comparison

ParameterBacterialViralTB/FungalCarcinomatous
WBC1,000–10,000+ (PMNs)10–500 (lymphocytes)100–500 (lymphocytes)10–200 (lymphocytes)
Protein↑↑ (100–500+)Normal–mildly ↑↑↑↑ (100–500+)↑↑ (50–200+)
Glucose↓↓ (<40 or <2/3 serum)Normal↓↓↓ (often <20)↓↓
Opening pressure↑↑ (200–500+)Normal–mildly ↑↑↑
Special testsGram stain, culture, latex agglutinationPCR (enterovirus, HSV)AFB smear/culture, India ink, CrAgCytology (×3 LPs), flow cytometry
Clinical Pearl
  • PMN-predominant CSF + low glucose = bacterial until proven otherwise
  • Early viral meningitis can have PMN predominance — repeat LP in 6–12 hours shows lymphocytic shift
  • TB and fungal can initially show mixed or PMN-predominant cells

Empiric Antibiotic Therapy by Age

Age GroupCommon OrganismsEmpiric Regimen
Neonates (<1 month)GBS, E. coli, ListeriaAmpicillin + gentamicin + cefotaxime
Infants/Children (1 mo–18 yr)S. pneumoniae, N. meningitidis, H. influenzaeCeftriaxone + vancomycin + dexamethasone
Adults (18–50 yr)S. pneumoniae, N. meningitidisCeftriaxone 2 g IV q12h + vancomycin 15–20 mg/kg IV q8–12h (target trough 15–20 mcg/mL) + dexamethasone 0.15 mg/kg IV q6h × 4 days
Adults ≥50 yr / Immunocompromised / PregnantS. pneumoniae, Listeria, gram-negativesAbove regimen + ampicillin 2 g IV q4h for Listeria coverage (cephalosporins do NOT cover Listeria)
Hospital-acquired / post-neurosurgical / penetrating trauma / CSF shuntS. aureus (incl. MRSA), Pseudomonas, gram-negatives, coag-neg StaphVancomycin 15–20 mg/kg IV q8–12h + cefepime 2 g IV q8h OR meropenem 2 g IV q8h (covers Pseudomonas + MRSA + gram-negatives)

Dexamethasone in Bacterial Meningitis

  • Timing: give BEFORE or WITH the first antibiotic dose — NOT after
  • Dose: 0.15 mg/kg IV q6h × 4 days
  • Proven benefit: primarily for S. pneumoniae — reduces hearing loss and mortality
  • Mechanism: decreases subarachnoid inflammation → less vasogenic edema and cochlear damage
  • Discontinue if organism is NOT S. pneumoniae (some experts continue for H. influenzae in children)

Chemoprophylaxis

OrganismProphylaxis IndicatedRegimen
N. meningitidisClose contacts (household, daycare, direct exposure to secretions)Rifampin × 2 days OR ciprofloxacin × 1 dose OR ceftriaxone IM × 1 dose
H. influenzae type bHousehold contacts with unvaccinated children <4 yrRifampin × 4 days
S. pneumoniaeNone (no prophylaxis for contacts)

Complications of Bacterial Meningitis

  • SIADH → hyponatremia (monitor sodium closely)
  • Hydrocephalus — communicating (inflammatory adhesions) or obstructive
  • Subdural empyema/effusion
  • Cerebral venous sinus thrombosis
  • Sensorineural hearing loss — most common long-term sequela; test audiometry in all survivors
  • Seizures — occur in ~30% of bacterial meningitis. Status epilepticus in CNS infection: treat per status protocol — levetiracetam 60 mg/kg IV load or fosphenytoin 20 PE/kg; consider cEEG monitoring since patients are encephalopathic and seizures may be subclinical (nonconvulsive status epilepticus is common)
  • Cerebral infarction — vasculitis/vasospasm of perforating arteries
💎 Board Pearl
  • LP contraindications (focal neuro deficit, papilledema, altered consciousness, immunocompromised, seizures) — get CT first BUT do NOT delay antibiotics; give empiric treatment BEFORE imaging
  • Add ampicillin for Listeria in neonates, elderly (>50), pregnant, and immunocompromised — cephalosporins do NOT cover Listeria
  • Waterhouse-Friderichsen syndrome: bilateral adrenal hemorrhage from N. meningitidis sepsis → DIC + shock + purpura fulminans
Brain Abscess & Empyema

Ring-Enhancing Lesion — Differential Diagnosis

FeatureBrain AbscessTumor (GBM/Metastasis)Toxoplasmosis
DWIRestricted diffusion (bright DWI, dark ADC)NO restricted diffusionVariable (mild restriction possible)
EnhancementThin, smooth ringThick, irregular ringRing or nodular
WallUniform thickness; thinner mediallyIrregular, variable thicknessVariable
LocationGray-white junction; near sourceVariableBasal ganglia, gray-white junction
MR SpectroscopyAmino acids, lactate, acetate, succinateElevated choline, ↓ NAALipid/lactate peaks
Key clueFever, source (sinusitis, endocarditis)No fever typicallyHIV + CD4 <100
💎 Board Pearl
  • DWI is a key differentiator: pyogenic abscess usually shows central restricted diffusion; necrotic tumors usually do not — characteristic but NOT pathognomonic (some metastases / high-cellularity tumors can restrict)
  • Abscess wall is thinner on the medial (ventricular) side — this is why abscesses rupture into ventricles (catastrophic complication)

Microbiology by Source

SourceCommon OrganismsNotes
Contiguous (sinusitis, otitis, dental)Streptococci, anaerobes (Bacteroides, Fusobacterium)Frontal lobe (sinusitis), temporal lobe/cerebellum (otitis)
Hematogenous (endocarditis, lung abscess)S. aureus, StreptococciOften multiple; at gray-white junction (MCA territory)
Post-surgical/traumaS. aureus, gram-negatives, PropionibacteriumAt surgical site; early or delayed
ImmunocompromisedToxoplasma, Nocardia, Aspergillus, ListeriaConsider atypical organisms; Nocardia = filamentous gram+ rod
Cryptogenic (no source found)Mixed or streptococcal~20% have no identifiable source

Treatment

  • Aspiration/excision: stereotactic aspiration for deep/eloquent locations; excision for superficial, accessible, or multiloculated
  • IV antibiotics: 6–8 weeks empiric regimens by source:
    • Community / contiguous (sinusitis, otitis, dental): ceftriaxone 2 g IV q12h + metronidazole 500 mg IV q8h ± vancomycin (if S. aureus suspected)
    • Hematogenous (endocarditis): add vancomycin 15–20 mg/kg IV q8–12h for S. aureus coverage
    • Post-neurosurgical / penetrating trauma: vancomycin + cefepime 2 g IV q8h OR meropenem 2 g IV q8h (Pseudomonas + MRSA + gram-negatives)
  • Medical only (no surgery): <2.5 cm, early cerebritis, multiple small abscesses, surgically inaccessible, or concurrent meningitis
  • Serial imaging: follow with contrast MRI every 1–2 weeks to confirm resolution

Subdural Empyema

  • Neurosurgical emergency — rapid deterioration over hours
  • Most common source: sinusitis (frontal) in young males; also otitis, post-craniotomy
  • Presentation: headache, fever, seizures, rapid focal deficits, meningismus
  • MRI: subdural collection with rim enhancement; DWI restriction
  • Treatment: urgent surgical drainage (craniotomy) + IV antibiotics 4–6 weeks

Spinal Epidural Abscess

  • Classic progression: back pain → radiculopathy → weakness → paralysis
  • #1 organism: S. aureus (60–70%)
  • Risk factors: IVDU, diabetes, spinal procedures, bacteremia
  • Diagnosis: MRI with gadolinium (entire spine — skip lesions in 10–15%)
  • Treatment: surgical decompression + IV antibiotics 6–8 weeks; medical-only if no neurological deficits and close monitoring possible
  • Prognosis: outcome depends on severity and duration of deficits pre-surgery — paralysis >24–48 hours is often irreversible
⚠ Warning
Spinal epidural abscess can be missed initially — maintain high suspicion in any patient with fever + back pain + risk factors. Delay in diagnosis is the most common cause of poor outcomes.
HSV Encephalitis

HSV-1 Encephalitis — Key Features

FeatureDetails
EpidemiologyMost common cause of sporadic fatal encephalitis; bimodal peak (children + elderly); no seasonal predilection
MechanismReactivation from trigeminal ganglion (most adults) > primary infection; travels along CN V to temporal lobe
PresentationFever, altered mental status, seizures (focal > generalized), personality/behavioral changes, aphasia, olfactory hallucinations
MRIMedial temporal lobe, insular cortex, orbitofrontal — T2/FLAIR hyperintensity; bilateral but asymmetric; hemorrhagic component; spares basal ganglia (vs. autoimmune encephalitis)
CTMay be normal early; later shows temporal lobe hypodensity ± hemorrhage
EEGPeriodic lateralized epileptiform discharges (PLEDs) over temporal region

CSF & Diagnosis

CSF ParameterFindings
WBC10–500 cells; lymphocytic predominance
ProteinMildly–moderately elevated
GlucoseUsually normal
RBCsOften present (hemorrhagic encephalitis) — xanthochromic supernatant
HSV PCRSensitivity 98%, specificity 94%; can be NEGATIVE in first 72 hours — repeat if high clinical suspicion
NoteNormal CSF does NOT exclude HSV encephalitis (up to 5% initially normal)

Treatment

  • IV acyclovir 10 mg/kg q8h × 14–21 days — start empirically at first suspicion, do NOT wait for PCR results
  • Dose by IDEAL BODY WEIGHT in obese patients; infuse over ≥1 hour with pre-hydration to prevent crystalline nephropathy
  • Untreated mortality: 70%; with acyclovir: ~20%
  • Adverse effects: nephrotoxicity (crystalluria — ensure adequate hydration), thrombocytopenia, neurotoxicity (especially in renal impairment)
  • Repeat PCR at end of treatment — if still positive, extend course

Post-HSV Anti-NMDAR Encephalitis

⚠ Warning
Post-HSV anti-NMDAR encephalitis: ~20–30% of patients (especially children) develop autoimmune anti-NMDAR encephalitis weeks after HSV recovery (median ~27 days). New movement disorder (orofacial dyskinesia, chorea) or psychiatric symptoms post-treatment → send CSF NMDAR antibodies; treat with immunotherapy (steroids, IVIg, PLEX, rituximab) — do NOT assume HSV relapse.

HSV-2 Neurological Syndromes

  • Neonatal HSV encephalitis: acquired perinatally; diffuse brain involvement (not temporal-predominant); high mortality
  • Mollaret meningitis: recurrent aseptic meningitis (HSV-2 > HSV-1); self-limited episodes; large endothelial cells (Mollaret cells) in CSF
  • Sacral radiculitis: urinary retention, saddle anesthesia (Elsberg syndrome)
💎 Board Pearl
  • Temporal lobe lesion + fever + seizures = start acyclovir immediately — do not wait for PCR; delay increases mortality
  • HSV PCR can be negative in first 72 hours — repeat LP if initial PCR is negative but suspicion is high
  • HSV encephalitis spares the basal ganglia — basal ganglia involvement suggests autoimmune encephalitis (anti-NMDA-R) or other viral causes
  • Post-HSV anti-NMDAR encephalitis: ~20–30% develop autoimmune anti-NMDAR encephalitis weeks (median ~27 days) after HSV recovery — new dyskinesia or psychiatric symptoms = send CSF NMDAR Ab and treat with immunotherapy, not more acyclovir
  • Mollaret meningitis = recurrent lymphocytic meningitis — caused by HSV-2; benign self-limited episodes
Other Viral Encephalitides

Arboviruses

VirusVectorKey FeaturesBoard Buzzword
West Nile (WNV)Culex mosquitoAcute flaccid paralysis (anterior horn cell); encephalitis in elderly; tremor, parkinsonism; IgM serum/CSFPolio-like flaccid paralysis + encephalitis in summer
Eastern Equine (EEE)Aedes/Culiseta mosquitoWorst prognosis of arboviruses (33–70% mortality); children & elderly; basal ganglia/thalamus involvementHighest mortality arboviral encephalitis
St. Louis EncephalitisCulex mosquitoSimilar to WNV; elderly; SIADH common; Midwest/South USSIADH + encephalitis
Japanese EncephalitisCulex mosquitoThalamic lesions on MRI; most common vaccine-preventable encephalitis worldwide; AsiaBilateral thalamic lesions + Asia travel
ZikaAedes mosquitoCongenital microcephaly; Guillain-Barré syndrome in adults; sexual transmissionMicrocephaly + GBS
La CrosseAedes triseriatusChildren; Midwest US; seizures common; generally good prognosisPediatric encephalitis + seizures

Non-Arboviral Encephalitides

VirusKey Neurological ManifestationsBoard-Testable Facts
CMVVentriculoencephalitis (periventricular enhancement); polyradiculopathy; retinitisHIV + CD4 <50; CMV polyradiculopathy has PMN-predominant CSF (unusual for viral); induction: ganciclovir 5 mg/kg IV q12h + foscarnet 60–90 mg/kg IV q12h × 2–3 weeks, then maintenance until immune reconstitution
VZVVasculopathy (large + small vessel → strokes); multifocal leukoencephalopathy; cerebellitis; Ramsay HuntRamsay Hunt = CN VII palsy + vesicles in ear + hearing loss; VZV vasculopathy can occur WITHOUT rash; CSF VZV IgG:albumin ratio > VZV PCR
EBVAlice in Wonderland syndrome; cerebellitis; encephalitis; GBS; CNS lymphoma (immunocompromised)Alice in Wonderland = metamorphopsia (objects appear distorted in size)
RabiesEncephalitic (furious): hydrophobia, aerophobia, autonomic instability; Paralytic (dumb): ascending paralysis mimics GBSNegri bodies (eosinophilic inclusions in Purkinje cells); fatal once symptomatic. PEP (immunocompetent): HRIG 20 IU/kg infiltrated around wound (remainder IM distant from vaccine site) + rabies vaccine on days 0, 3, 7, 14; add day 28 if immunocompromised
Enterovirus D68Acute flaccid myelitis (AFM); polio-like; anterior horn cell involvementChildren; late summer/fall; asymmetric limb weakness; MRI shows longitudinal gray matter lesion in cord
Measles (SSPE)Subacute sclerosing panencephalitis — years after infection; cognitive decline, myoclonus, periodic complexes on EEGElevated measles antibody titers in CSF; periodic stereotyped EEG complexes (Radermecker complexes)
HHV-6 (post-transplant limbic encephalitis)Acute amnestic syndrome + mesial temporal seizures in allogeneic stem-cell / bone-marrow transplant recipients (usually within 60 d post-transplant)MRI: bilateral hippocampal T2/FLAIR hyperintensity (HSV-mimic but typically NO hemorrhage); CSF HHV-6 PCR positive; treat with foscarnet ± ganciclovir
Bartonella henselae (cat-scratch)Kitten/cat exposure → regional lymphadenopathy; rare CNS: encephalopathy, seizures, status epilepticus, neuroretinitis with optic-disc swelling + “macular star” on fundoscopyBartonella IgM/IgG serology; CSF often normal; treat doxycycline + rifampin for CNS disease

Rhombencephalitis (Brainstem Encephalitis) — Differential

  • Infectious (most common): Listeria monocytogenes (#1 — deli meats, soft cheeses, raw milk; pregnant women, >65 y, immunocompromised), enterovirus 71 (children, hand-foot-mouth outbreaks), HSV (less common), tuberculosis (basal meningitis pattern).
  • Autoimmune: Behçet disease (most common autoimmune cause; oral/genital ulcers, uveitis, brainstem & basal ganglia lesions), CLIPPERS (corticosteroid-responsive, pontine punctate “peppering” enhancement), neurosarcoidosis, anti-MOG, NMOSD.
  • Paraneoplastic: SCLC — anti-Hu, anti-Ri (oculomotor abnormalities + ataxia + opsoclonus), anti-Ma2 (testicular germ-cell tumors; brainstem + diencephalon), anti-Yo (ovarian/breast, cerebellum-predominant).
💎 Board Pearl — Listeria Rhombencephalitis
  • Biphasic illness: prodromal fever/headache → cranial neuropathies (V, VII, IX–X) + ataxia + altered consciousness after a few days.
  • CSF often only mildly inflammatory (sometimes lymphocytic) — gram stain low sensitivity. Blood cultures positive in ~60%.
  • Treatment: ampicillin 2 g IV q4h + gentamicin (synergy) × ≥3 weeks. TMP-SMX is second-line for penicillin allergy. Empiric ampicillin should be added to standard meningitis regimens in pregnant, elderly, or immunocompromised patients.
💎 Board Pearl
  • West Nile virus: asymmetric acute flaccid paralysis + encephalitis in summer/fall = WNV; anterior horn cells (like polio)
  • CMV polyradiculopathy: the one viral infection causing PMN-predominant CSF — easily confused with bacterial
  • VZV vasculopathy: can cause strokes WITHOUT rash — check CSF VZV IgG/albumin ratio (more sensitive than PCR)
  • Rabies is 100% fatal once symptomatic — PEP with immunoglobulin + vaccine series is the only chance
COVID-19 Neurologic Complications

Spectrum of Neurologic Involvement

CategoryManifestationsKey Points
Encephalopathy / DeliriumMost common neuro complication of hospitalized COVID; toxic-metabolic + hypoxic + cytokine-mediatedIndependent predictor of in-hospital mortality; often outlasts respiratory illness
Ischemic strokeLarge-vessel occlusion in younger patients; hypercoagulable state (elevated D-dimer, antiphospholipid antibodies); cryptogenic mechanism commonStroke risk highest in first 2 weeks; consider COVID in young stroke during outbreak
Hemorrhagic stroke / ICHAssociated with anticoagulation, endothelial injury, severe disease (ECMO)Higher mortality than COVID-related ischemic stroke
Anosmia / ageusiaOften early/isolated symptom; due to olfactory epithelium ACE2 expression; usually resolves but persistent in ~10–20%Highly suggestive of COVID in early pandemic; persistence >6 months suggests long COVID
Guillain-Barré syndromePost-infectious (typically 1–4 weeks after); AIDP > AMAN; Miller Fisher variant reportedStandard treatment with IVIg or PLEX
ADEM-like / acute necrotizing encephalopathyMultifocal demyelinating lesions; hemorrhagic ANE with bilateral thalamic involvement reportedTreat with high-dose steroids ± IVIg/PLEX
Encephalitis / meningoencephalitisRare direct CNS infection; CSF SARS-CoV-2 PCR usually negative; often parainfectious/autoimmuneConsider autoimmune encephalitis workup (NMDAR, others)
Post-COVID cognitive symptoms ("brain fog")Attention, working memory, processing speed deficits; fatigue; dysautonomia (POTS); persists monthsComponent of long COVID / PASC; multidisciplinary rehab
Critical illness neuromyopathyICU-acquired weakness in prolonged ventilation; superimposed on COVID myopathyCommon in survivors of severe COVID requiring prolonged ICU stays
💎 Board Pearl
  • Encephalopathy is the #1 COVID neuro complication — independent mortality predictor
  • Young patient with large-vessel stroke + COVID — consider hypercoagulable state; check antiphospholipid antibodies
  • Anosmia/ageusia often early and isolated — due to olfactory epithelium involvement, not direct CNS invasion
  • Post-COVID cognitive symptoms are part of long COVID / PASC and may persist months — rule out treatable causes (depression, sleep disorder, dysautonomia)
HIV Neurology

HIV-Associated Neurocognitive Disorders (HAND)

CategoryCognitive ImpairmentFunctional ImpairmentKey Features
ANI (Asymptomatic Neurocognitive Impairment)≥1 SD below mean in ≥2 cognitive domainsNoneDetected on formal testing only; most common HAND category on ART
MND (Mild Neurocognitive Disorder)≥1 SD below mean in ≥2 cognitive domainsMild (self-reported or observed)Difficulty with complex tasks, slowed processing
HAD (HIV-Associated Dementia)≥2 SD below mean in ≥2 cognitive domainsMarked impairment in ADLsSubcortical dementia pattern: psychomotor slowing, apathy, poor concentration; MRI shows cerebral atrophy + white matter changes

HIV-Associated Conditions by CD4 Count

CD4 CountConditions
Any CD4HIV seroconversion meningitis, GBS/CIDP, DSPN, vacuolar myelopathy, myopathy, inflammatory myopathy
<500Herpes zoster (VZV), Kaposi sarcoma, oral hairy leukoplakia, TB
<200Toxoplasmosis, PML (JC virus), Cryptococcal meningitis, CNS lymphoma
<100CNS lymphoma (EBV-driven), CMV encephalitis/radiculopathy
<50CMV retinitis, MAC (Mycobacterium avium complex)

Toxoplasmosis vs. CNS Lymphoma

FeatureToxoplasmosisPrimary CNS Lymphoma
CD4 count<100 (usually <200)<50–100
Number of lesionsMultiple (usually)Solitary (60–70%) or few
LocationBasal ganglia, corticomedullary junctionPeriventricular, corpus callosum, deep gray matter
EnhancementRing-enhancing with edemaHomogeneous or ring-enhancing
Toxoplasma IgGUsually positive (reactivation)Usually negative (not related)
CSF EBV PCRNegativePositive (EBV-driven lymphoma)
Thallium SPECT / PETNo uptake (cold)Increased uptake (hot)
Initial approachEmpiric treatment: pyrimethamine 200 mg PO load, then 50–75 mg/day + sulfadiazine 1,000–1,500 mg PO q6h + leucovorin 10–25 mg/day for ≥6 weeks induction (2-week empiric trial is for assessing response, NOT the full course); alternative: TMP-SMX or pyrimethamine + clindamycin (sulfa allergy)Brain biopsy if no response to empiric toxo therapy
Response to empiric TxClinical + radiographic improvement in 2 weeksNo improvement → biopsy

Other HIV-Associated Neurological Conditions

ConditionKey Features
Vacuolar myelopathyPosterior columns + corticospinal tracts; mimics B12 deficiency (subacute combined degeneration); progressive spastic paraparesis + sensory ataxia; thoracic cord; ART is primary treatment
DSPN (Distal Symmetric Polyneuropathy)Most common neurological complication of HIV; stocking-glove distribution; painful burning; can be from HIV or ART (didanosine, stavudine); treat with ART optimization ± gabapentin/duloxetine
HIV-associated GBS/CIDPCan occur at any CD4 count; CSF may show pleocytosis (unlike typical GBS where protein is up but cells are not); treat with IVIg/PLEX as standard + ART
Progressive polyradiculopathy (CMV)CD4 <50; rapidly progressive cauda equina syndrome; PMN-predominant CSF; CMV PCR positive; ganciclovir 5 mg/kg IV q12h + foscarnet 60–90 mg/kg IV q12h induction

Immune Reconstitution Inflammatory Syndrome (IRIS)

  • Definition: paradoxical worsening after starting ART due to immune recovery and exaggerated inflammatory response to existing infection
  • Timing: usually 2–8 weeks after ART initiation; more common with very low baseline CD4
  • Common triggers: PML, TB, Cryptococcus, Toxoplasmosis, CMV
  • Treatment: continue ART + treat underlying infection + corticosteroids for severe IRIS
  • PML-IRIS: can cause fatal brain swelling — the most feared neurologic IRIS complication
💎 Board Pearl
  • Empiric toxo treatment first, biopsy second: if HIV + CD4 <200 + ring-enhancing lesions + Toxo IgG positive → treat empirically; biopsy only if no improvement in 2 weeks
  • Vacuolar myelopathy mimics B12 deficiency — check B12 level to exclude; both affect posterior columns and lateral corticospinal tracts
  • CSF pleocytosis in HIV-associated GBS — unlike classic GBS where cells are low (albuminocytologic dissociation)
Progressive Multifocal Leukoencephalopathy (PML)

Key Features

FeatureDetails
Causative agentJC virus (JCV) — polyomavirus; infects oligodendrocytes → demyelination
Risk groupsHIV (CD4 <200), natalizumab, rituximab, other immunosuppressants (mycophenolate, fingolimod), hematologic malignancies
PresentationSubacute progressive focal deficits: hemiparesis, visual field cuts, cognitive decline, ataxia; NO fever, NO headache
MRIMultifocal asymmetric white matter lesions; subcortical U-fibers involved; NO mass effect; NO enhancement (or minimal faint enhancement); T2/FLAIR hyperintense, T1 hypointense
CSFJCV PCR — sensitivity ~80% (higher with ultrasensitive assays); specificity >95%
PathologyDemyelination + bizarre giant astrocytes + oligodendroglial intranuclear inclusions (ground-glass appearance)
Brain biopsyGold standard if CSF JCV PCR is negative and clinical suspicion remains high
TreatmentRestore immune function: ART for HIV; stop offending drug (natalizumab, rituximab); no specific antiviral for JCV
PrognosisHIV-PML: ~50% 1-year survival with ART; natalizumab-PML: ~25% mortality; survivors often have significant disability

Natalizumab-Associated PML — Risk Stratification

Risk FactorDetails
JCV antibody statusJCV Ab negative = very low risk (~0.1/1,000); JCV Ab positive = increased risk
JCV antibody indexIndex ≤0.9 = lower risk; index >1.5 = highest risk
Treatment duration>24 months = significantly increased risk (especially >48 months)
Prior immunosuppressant usePrior use of azathioprine, methotrexate, cyclophosphamide → further ↑ risk
Highest-risk combinationJCV Ab+ (index >1.5) + >24 months natalizumab + prior immunosuppression → risk up to ~13/1,000
MonitoringJCV antibody testing every 6 months; brain MRI every 3–6 months in high-risk patients

PML vs. MS Lesions

FeaturePMLMS
LocationSubcortical U-fibers; parieto-occipital predominancePeriventricular; Dawson fingers
EnhancementNo or minimalActive lesions enhance (open ring)
Mass effectNoneTumefactive MS may have mass effect
ShapeConfluent, irregular borders; scalloped at cortexOvoid, well-defined
ProgressionRelentlessly progressiveRelapsing-remitting or progressive
💎 Board Pearl
  • PML triad: white matter lesions + NO mass effect + immunosuppressed = PML until proven otherwise
  • PML involves subcortical U-fibers (unlike MS which is periventricular) — key MRI differentiator
  • Natalizumab risk: JCV Ab index >1.5 + duration >24 months + prior immunosuppression = highest risk; extended-interval dosing may reduce risk
  • No specific antiviral exists for JCV — treatment is immune reconstitution only
Tuberculous Meningitis

Clinical Features

FeatureDetails
Classic presentationBasilar meningitis — subacute course (days–weeks) with headache, fever, meningismus, CN palsies
Cranial nerve palsiesCN VI most common (long intracisternal course); also CN II, III, IV, VII
HydrocephalusCommunicating (basilar exudates blocking CSF absorption); requires EVD or VP shunt
Vasculitis/StrokeBasal perforating arteries involved → lacunar infarcts (basal ganglia, internal capsule, thalamus)
TuberculomasRing-enhancing parenchymal lesions; can paradoxically enlarge on treatment
Spinal involvementArachnoiditis, radiculomyelopathy, Pott disease (vertebral TB)

CSF & Diagnosis

TestFindings/Performance
WBC100–500 cells; lymphocytic predominance (may be PMN-predominant early)
ProteinVery high (100–500+ mg/dL); can exceed 1 g/dL
GlucoseVery low (<45 mg/dL; often <20)
AFB smearSensitivity only 10–30%; large-volume repeated samples increase yield
AFB cultureGold standard but takes 2–8 weeks; sensitivity 50–80%
TB PCR (GeneXpert)Rapid results; sensitivity ~60–80% in CSF; WHO recommended; if positive, confirms diagnosis
ADA (adenosine deaminase)Elevated in TB meningitis; sensitivity ~80%; nonspecific

MRI Findings

  • Basal cistern enhancement (thick, nodular leptomeningeal enhancement) — most characteristic
  • Hydrocephalus — communicating type
  • Tuberculomas — ring-enhancing lesions; can be multiple; "target sign" (central calcification)
  • Infarcts — basal ganglia, thalamus, internal capsule (perforator territory)

Treatment

PhaseRegimenDuration
Intensive phase (RIPE)INH 5 mg/kg/day (max 300 mg) + Rifampin 10 mg/kg/day (max 600 mg; some advocate 15–20 mg/kg for CNS penetration) + Pyrazinamide 25 mg/kg + Ethambutol 15–20 mg/kg2 months
Continuation phaseRifampin + Isoniazid (same doses)7–10 months
Total duration9–12 months (longer than pulmonary TB)
Adjunctive dexamethasone (Thwaites regimen)0.3–0.4 mg/kg/day IV tapered over 6–8 weeksproven mortality benefitStarted with anti-TB therapy
Pyridoxine (B6)25–50 mg/day — always co-administer with INH to prevent peripheral neuropathyThroughout INH course
💎 Board Pearl
  • Basilar meningitis + CN palsies + hydrocephalus + strokes = think TB or sarcoid — these are the two classic causes of basilar meningitis
  • Dexamethasone is proven to reduce mortality in TB meningitis — unlike most other forms of meningitis (except S. pneumoniae)
  • Paradoxical worsening: tuberculomas can enlarge during treatment despite clinical improvement — this is NOT treatment failure; continue therapy
  • CSF pattern: lymphocytic + very high protein + very low glucose = TB meningitis until proven otherwise
Neurosyphilis

Stages of Neurosyphilis

StageTimingManifestationsKey Features
AsymptomaticAny stageCSF abnormalities only (pleocytosis, ↑ protein, + VDRL)Diagnosed by LP in patients with syphilis and neurologic risk
Syphilitic meningitisEarly (months–years)Headache, meningismus, CN palsies (VII, VIII, II)CSF lymphocytic pleocytosis; hearing loss common
Meningovascular5–12 yearsStrokes (especially MCA territory); Heubner arteritis (large vessel), Nissl-Alzheimer arteritis (small vessel)Young patient with stroke + risk factors = screen for syphilis
General paresis (GPI)10–25 yearsFrontal dementia: personality change, grandiosity, psychosis, cognitive decline; Argyll Robertson pupilsMnemonic: PARESIS — Personality, Affect, Reflexes (↑), Eye (AR pupils), Sensorium (↓), Intellect (↓), Speech
Tabes dorsalis15–25 yearsLightning pains, posterior column loss (proprioception, vibration), sensory ataxia, Charcot joints, Argyll Robertson pupils, Romberg+Posterior column degeneration; absent DTRs (afferent arc disrupted)

Diagnosis — Serologic Testing

TestTypeUseKey Points
RPR / VDRL (serum)Non-treponemalScreening + activity monitoringQuantitative; titers ↓ with treatment; false positives (lupus, pregnancy, antiphospholipid syndrome)
FTA-ABS (serum)TreponemalConfirmatoryRemains positive for life (even after treatment); cannot monitor treatment response
CSF VDRLNon-treponemalCSF diagnosisHighly specific but NOT sensitive (~30–70% sensitivity); if positive, confirms neurosyphilis
CSF FTA-ABSTreponemalCSF diagnosisSensitive but NOT specific; if NEGATIVE, essentially rules out neurosyphilis

Argyll Robertson Pupil

  • Accommodates but does NOT react to light (“prostitute’s pupil” — accommodates but does not react)
  • Bilateral, small, irregular pupils
  • Lesion location: periaqueductal gray / pretectal area (disrupts light reflex but spares near reflex)
  • Pathognomonic for neurosyphilis (though diabetes can produce a similar finding)

Treatment

RegimenDetails
IV penicillin G18–24 million units/day (3–4 MU q4h) × 10–14 days
AlternativeIM procaine penicillin + oral probenecid × 10–14 days
Penicillin allergyPenicillin allergy evaluation and desensitization is preferred per CDC. Alternative (limited data): ceftriaxone 1–2 g daily IM or IV × 10–14 days
Follow-upCSF every 6 months until normalization; CSF VDRL should decline; cell count normalizes first
Retreatment criteriaCSF pleocytosis not declining at 6 months, or CSF VDRL not declining at 2 years
💎 Board Pearl
  • Argyll Robertson pupil = neurosyphilis until proven otherwise — the most tested physical finding
  • CSF VDRL: specific but NOT sensitive (if positive = neurosyphilis; if negative = does not exclude it)
  • CSF FTA-ABS: sensitive but NOT specific (if negative = virtually rules out neurosyphilis)
  • Tabes dorsalis: lightning pains + sensory ataxia + Romberg+ + absent knee jerks + Charcot joints + AR pupils
  • Young stroke + CSF pleocytosis = consider meningovascular syphilis — always screen for syphilis in unexplained young stroke
Lyme Neuroborreliosis

Clinical Features

ManifestationDetails
Cranial neuritisFacial palsy (CN VII) — often bilateral (Lyme is a leading cause of bilateral facial palsy); other CN involvement less common
Bannwarth syndromePainful meningoradiculitis — severe radicular pain (often nocturnal) + lymphocytic meningitis ± cranial neuritis; classic European presentation
Lymphocytic meningitisSubacute headache, mild meningismus, photophobia
Encephalomyelitis (rare)Parenchymal CNS involvement: white matter lesions, myelopathy, encephalopathy
Peripheral neuropathyMononeuropathy multiplex, plexopathy, distal axonopathy (late/chronic)

Diagnosis

  • CSF: lymphocytic pleocytosis (typically 100–200 cells), elevated protein, normal glucose
  • Intrathecal antibody production (CSF:serum Borrelia antibody index >1) — key for parenchymal CNS Lyme
  • Serum two-tier testing: ELISA → Western blot (or modified two-tier with two EIAs)
  • CSF Borrelia PCR — low sensitivity (~20–30%)

Treatment

ManifestationRegimen
Cranial neuritis (incl. isolated facial palsy), meningitis, radiculoneuritis (non-parenchymal)Doxycycline 100 mg PO BID × 14–21 days OR Ceftriaxone 2 g IV daily / cefotaxime / IV penicillin G × 14–21 days — oral doxycycline now considered equivalent to IV for non-parenchymal CNS Lyme (2020 AAN/ACR/IDSA)
Parenchymal brain/spinal cord involvement (encephalomyelitis)IV therapy required: Ceftriaxone 2 g IV daily × 14–28 days (alternatives: cefotaxime, IV penicillin G)
Children <8 yr / pregnancyAmoxicillin or ceftriaxone (avoid doxycycline in young children for prolonged courses)
💎 Board Pearl
  • Bilateral facial palsy + tick exposure / endemic area = Lyme until proven otherwise (other causes: sarcoid, GBS, HIV seroconversion)
  • Bannwarth syndrome: painful radiculitis + lymphocytic CSF + cranial neuritis = classic European neuroborreliosis
  • Intrathecal antibody index >1 is the gold-standard CSF finding (more reliable than CSF PCR)
  • Per 2020 AAN/ACR/IDSA: oral doxycycline OR IV ceftriaxone/cefotaxime/penicillin G × 14–21 d is acceptable for meningitis, cranial neuritis, and radiculoneuritis; reserve IV therapy for parenchymal CNS disease
Whipple Disease (CNS)

Clinical Features

  • Causative organism: Tropheryma whipplei (gram-positive actinomycete)
  • Systemic: chronic diarrhea, malabsorption, weight loss, arthralgias, lymphadenopathy — may precede CNS by years
  • CNS Whipple: cognitive decline / dementia, supranuclear gaze palsy (especially vertical), myoclonus, ataxia, seizures, hypothalamic dysfunction
  • Oculomasticatory myorhythmia (slow, rhythmic convergence of eyes synchronized with mandibular contraction) — pathognomonic; also oculo-facial-skeletal myorhythmia

Diagnosis

  • Small bowel biopsy: PAS-positive macrophages
  • CSF / brain biopsy: PCR for T. whipplei; PAS-positive inclusions
  • MRI: nonspecific T2 hyperintensities in mesial temporal lobes, hypothalamus, basal ganglia, brainstem; may enhance

Treatment

  • Induction: Ceftriaxone 2 g IV daily × 2–4 weeks (alternative: IV penicillin G + streptomycin)
  • Maintenance: TMP-SMX DS PO BID × 1–2 years (CNS-penetrating; sulfa allergy → doxycycline + hydroxychloroquine)
  • IRIS can occur after starting treatment — may require steroids
💎 Board Pearl
  • Oculomasticatory myorhythmia is pathognomonic for CNS Whipple — nothing else causes it
  • Whipple is a classic treatable CJD mimic — must exclude in rapidly progressive dementia with movement disorder
  • Dementia + supranuclear vertical gaze palsy + myoclonus + GI symptoms = think Whipple (not just PSP)
Fungal & Parasitic CNS Infections

Fungal CNS Infections

OrganismRisk GroupKey FeaturesDiagnosisTreatment
Cryptococcus neoformansHIV (CD4 <100); transplantSubacute meningitis; ↑↑ opening pressure (>25 cmH2O); headache, fever, altered mental status; papilledemaIndia ink (budding yeast with capsule); cryptococcal antigen (CrAg) serum/CSF (sensitivity >95%)Induction: liposomal amphotericin B 3–4 mg/kg/day IV + flucytosine 25 mg/kg PO QID (100 mg/kg/day) × 2 weeks → Consolidation: fluconazole 800 mg/day × 8 weeks → Maintenance: fluconazole 200 mg/day until immune reconstitution. Serial LPs to keep OP <20 cmH2O (remove 20–30 mL CSF; VP shunt if refractory).
Coccidioides immitisSouthwest US, Mexico (desert)Basilar meningitis; hydrocephalus; CSF eosinophilia (sometimes); chronic courseCSF complement-fixing antibodies; serum serologyFluconazole (high dose) — lifelong treatment; intrathecal amphotericin for refractory cases
AspergillusNeutropenic; transplant; chronic steroidsAngioinvasive → hemorrhagic infarcts; brain abscess; sinusitis with CNS extensionTissue biopsy (septate hyphae with acute-angle branching); galactomannan (serum/CSF)Voriconazole (first-line); surgical debridement for abscess
Mucormycosis (Zygomycetes)DKA; neutropenic; iron overload (deferoxamine)Rhinocerebral: sinusitis → orbita → brain; black eschar on palate/nasal turbinate; cavernous sinus thrombosis; CN palsiesTissue biopsy (broad, non-septate hyphae, right-angle branching); cultures often negativeAmphotericin B (liposomal) + surgical debridement + correct underlying condition (DKA); mortality 50–70%
HistoplasmaOhio/Mississippi River Valley; HIVChronic meningitis; brain granulomas; CNS histoplasmosis rareHistoplasma antigen (urine/CSF); CSF antibody; cultureLiposomal amphotericin B → itraconazole maintenance
Clinical Pearl
  • Cryptococcal meningitis: elevated ICP is the #1 cause of death — serial LPs with removal of 20–30 mL CSF to maintain OP <20 cmH2O; VP shunt if refractory
  • Mucormycosis: black eschar + DKA + sinusitis = rhinocerebral mucormycosis; tissue biopsy is required (cultures often negative)

Parasitic CNS Infections

OrganismKey FeaturesDiagnosisTreatment
Neurocysticercosis (Taenia solium)Most common cause of acquired epilepsy worldwide; stages: vesicular (viable cyst + scolex) → colloidal (degenerating, edema) → granular-nodular → calcified; seizures are #1 presentationMRI/CT: cyst with scolex (dot within cyst); "Swiss cheese brain" (multiple cysts); serum/CSF antibodies (EITB — sensitivity ~95% for ≥2 cysts)1–2 viable parenchymal cysts: albendazole monotherapy 15 mg/kg/day PO divided BID (max 1,200 mg/day) × 10–14 days + corticosteroids started BEFORE antiparasitic + AED. >2 viable parenchymal cysts: albendazole + praziquantel 50 mg/kg/day + steroids. Single enhancing lesion: IDSA/ASTMH suggests albendazole + steroids (NOT steroids alone). Calcified lesions: NO antiparasitic — symptomatic/seizure management only. Image eyes before treatment (ocular cysts contraindicate antiparasitics).
Cerebral malaria (P. falciparum)Children in sub-Saharan Africa; coma, seizures; ring-form trophozoites; parasitized RBC sequestration in cerebral microvasculature; retinal hemorrhagesPeripheral blood smear (ring forms); rapid diagnostic test (RDT)IV artesunate immediately (superior to quinine), then full oral follow-on therapy once parasitemia ≤1% and patient can tolerate PO. Exchange transfusion is NO LONGER recommended as adjunctive therapy (no proven benefit per CDC).
ToxoplasmosisSee HIV section; also congenital toxoplasmosis: chorioretinitis + intracranial calcifications + hydrocephalusSerology; imaging; PCRPyrimethamine 200 mg PO load → 50–75 mg/day + sulfadiazine 1,000–1,500 mg PO q6h + leucovorin 10–25 mg/day × ≥6 weeks induction; maintenance until immune reconstitution
Naegleria fowleri (PAM)Primary amebic meningoencephalitis; swimming in warm freshwater; rapid fulminant course (death in 3–7 days); hemorrhagic meningoencephalitisMotile trophozoites on wet mount of CSFAmphotericin B + miltefosine (nearly always fatal despite treatment)
Acanthamoeba (GAE)Granulomatous amebic encephalitis; immunocompromised; chronic course (weeks–months); multiple ring-enhancing lesionsBrain biopsy showing trophozoites/cystsMiltefosine-based combinations; often fatal
💎 Board Pearl
  • Neurocysticercosis: 1–2 viable cysts → albendazole + steroids (steroids before antiparasitic); >2 viable cysts → albendazole + praziquantel + steroids; single enhancing lesion → albendazole + steroids (NOT steroids alone); calcified lesions → symptomatic only
  • Scolex on imaging (dot-within-cyst) is pathognomonic for neurocysticercosis
  • Cryptococcal meningitis: death is from elevated ICP, not the infection itself — aggressive CSF pressure management is critical
  • Mucormycosis: rhinocerebral + DKA + black eschar = classic triad; Aspergillus has septate, acute-angle branching vs. Mucor has non-septate, right-angle branching
  • Naegleria: swimming in warm freshwater → fulminant meningitis within days = PAM
Prion Diseases

Creutzfeldt-Jakob Disease (CJD) — Classification

TypeFrequencyAgeMechanismKey Distinguishing Features
Sporadic (sCJD)85%60–70 yrSpontaneous PrPC → PrPSc misfoldingRapidly progressive dementia + myoclonus; cortical ribboning on DWI; PSWCs on EEG
Familial (fCJD)10–15%Variable (younger)PRNP gene mutations (autosomal dominant)Family history; includes GSS (Gerstmann-Sträussler-Scheinker) and FFI (Fatal Familial Insomnia)
Variant (vCJD)<1%Young (median 28 yr)BSE (mad cow) exposurePsychiatric onset; pulvinar sign on MRI; tonsil biopsy positive for PrPSc; longer course (14 months)
Iatrogenic (iCJD)RareVariableContaminated dura mater grafts, corneal transplants, growth hormone, neurosurgical instrumentsPresentation depends on route of exposure; cerebellar symptoms predominate in peripheral inoculation

Sporadic CJD — Diagnostic Features

TestFindingsBoard-Testable Points
MRI (DWI/FLAIR)Cortical ribboning (cortical DWI hyperintensity); caudate/putamen hyperintensityDWI is the most sensitive MRI sequence; can precede clinical symptoms
CSF RT-QuICDetects misfolded PrPSc by seeded amplificationMost sensitive (92–95%) AND specific (99–100%); has replaced 14-3-3 as preferred test
CSF 14-3-3Elevated (marker of rapid neuronal destruction)Sensitive but NOT specific (positive in stroke, encephalitis, seizures); now largely superseded by RT-QuIC
CSF t-tauMarkedly elevated (>1,150 pg/mL)More specific than 14-3-3; combined with RT-QuIC for highest accuracy
EEGPeriodic sharp wave complexes (PSWCs) — 1–2 Hz generalizedSeen in ~67% of sCJD; often absent in early disease and in vCJD; can be obscured by myoclonus
Pathology (gold standard)Spongiform change, neuronal loss, astrogliosis, PrPSc immunostainingBrain biopsy rarely needed given RT-QuIC availability; autopsy confirmatory

CJD Variants & Related Prion Diseases

Variant/DiseaseKey Features
Heidenhain variantVisual cortex predominant → cortical blindness, visual agnosia, Balint syndrome as initial presentation; occipital cortical ribboning
MV2 subtypeLonger course (~17 months); prominent ataxia; less myoclonus; less prominent EEG changes
Gerstmann-Sträussler-Scheinker (GSS)PRNP mutation; cerebellar ataxia predominant; slower course (2–10 years); multicentric PrP plaques
Fatal Familial Insomnia (FFI)PRNP D178N mutation (codon 129 Met); progressive insomnia → dysautonomia → dementia; thalamic gliosis; death in 7–36 months
Variably Protease-Sensitive Prionopathy (VPSPr)Sporadic; slower course than sCJD; psychiatric symptoms and speech difficulties; less protease resistance of PrP

Rapidly Progressive Dementia — CJD Mimics

  • Autoimmune encephalitis (anti-NMDA-R, anti-LGI1, anti-CASPR2) — treatable, must exclude
  • CNS lymphoma / Intravascular lymphoma
  • Hashimoto encephalopathy (SREAT) — anti-TPO antibodies; steroid-responsive
  • CNS vasculitis
  • Neurosyphilis
  • Whipple disease — oculomasticatory myorhythmia is pathognomonic
  • Toxic/metabolic: lithium, bismuth, heavy metals
💎 Board Pearl
  • Rapidly progressive dementia + myoclonus + cortical ribboning on DWI = CJD — the classic board question triad
  • RT-QuIC has replaced 14-3-3 as the preferred CSF test — sensitivity 92–95%, specificity 99–100%
  • Variant CJD: young patient + psychiatric onset + pulvinar sign on MRI = vCJD; confirm with tonsil biopsy
  • Fatal Familial Insomnia: PRNP mutation + progressive insomnia + thalamic atrophy + dysautonomia
  • Always exclude treatable mimics before accepting CJD diagnosis — autoimmune encephalitis and CNS lymphoma are the most important to rule out
  • 14-3-3 is NOT specific — elevated after stroke, seizures, and encephalitis; RT-QuIC is far superior
🔒

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