Basic Science Physiology

Last Minute Review

Physiology — Last Minute Review

Rapid Review

A last-minute review of high-yield neurophysiology facts for the RITE and board exams. Tables, key associations, and must-know one-liners — designed for a quick pass the night before.

Neurotransmitters & Receptors
NeurotransmitterReceptor TypesLocationClinical Relevance
ACh (nicotinic)nAChR (ligand-gated Na+/K+)NMJ, autonomic ganglia, CNSMG (anti-AChR Ab), Lambert-Eaton (anti-VGCC); succinylcholine depolarizing block
ACh (muscarinic)M1 (cortex/hippocampus), M2 (heart), M3 (smooth muscle/glands)Parasympathetic end-organs, basal forebrain → cortexM1 loss → Alzheimer cognitive decline; anticholinergics → delirium; M2 → bradycardia
DopamineD1/D5 (excitatory, ↑cAMP); D2/D3/D4 (inhibitory, ↓cAMP)Nigrostriatal, mesolimbic, mesocortical, tuberoinfundibularD2 blockade → parkinsonism + hyperprolactinemia; D1 = direct pathway (go); D2 = indirect pathway (stop)
Serotonin (5-HT)5-HT1A/1B/1D (inhibitory); 5-HT2A/2C; 5-HT3 (ligand-gated ion channel); 5-HT4–7Raphe nuclei → diffuse cortical/subcortical projections5-HT1B/1D agonists = triptans (migraine); serotonin syndrome (clonus, hyperthermia, agitation); 5-HT3 = ondansetron
GABAGABA-A (ligand-gated Cl− channel); GABA-B (G-protein, K+/Ca2+)GABA-A: ubiquitous cortical interneurons; GABA-B: spinal cord, thalamusGABA-A: benzos (frequency), barbiturates (duration), alcohol; GABA-B: baclofen; anti-GAD65 Ab → stiff-person syndrome
GlutamateNMDA (Ca2+; Mg2+ block; glycine co-agonist); AMPA (Na+, fast EPSP); KainateUbiquitous excitatory — cortex, hippocampus, spinal cordNMDA: LTP/memory, excitotoxicity (stroke); anti-NMDAR encephalitis; ketamine/PCP = NMDA antagonists; AMPA = fast synaptic transmission
Norepinephrineα1 (Gq, vasoconstriction); α2 (Gi, presynaptic inhibition); β1/β2 (Gs)Locus coeruleus → diffuse cortical projectionsα2 agonists (clonidine) ↓ sympathetic outflow; β-blockers → tremor Rx; NE reuptake inhibitors (SNRIs, TCAs)
GlycineGlyR (ligand-gated Cl− channel)Spinal cord & brainstem (Renshaw cells)Strychnine = GlyR antagonist → opisthotonus; tetanus toxin blocks glycine/GABA release; NMDA co-agonist
HistamineH1 (wakefulness); H2 (gastric acid); H3 (presynaptic autoreceptor)Tuberomammillary nucleus → cortexH1 antagonists → sedation; H3 inverse agonist (pitolisant) for narcolepsy
Endorphins/Enkephalinsμ (analgesia, euphoria); δ; κPeriaqueductal gray, dorsal horn, limbic systemμ agonists = opioids; naloxone = antagonist; descending pain modulation
💎 Board Pearl
  • GABA-A: benzos ↑ frequency of Cl− channel opening; barbiturates ↑ duration — mnemonic: Benzo = Frequency, Barbiturate = Duration
  • NMDA requires both glutamate + glycine and membrane depolarization (to relieve Mg2+ block) — voltage-dependent AND ligand-gated
  • Only 5-HT3 is an ion channel — all other serotonin receptors are G-protein coupled
  • D2 receptor blockade explains ALL antipsychotic side effects: parkinsonism (nigrostriatal), hyperprolactinemia (tuberoinfundibular), akathisia
Ion Channels & Channelopathies
ChannelGeneDiseaseKey Feature
Na+ (brain)SCN1ADravet syndrome (SMEI)LOF mutation; seizures worsen with Na+ channel blockers (lamotrigine, phenytoin)
Na+ (brain)SCN2ABenign familial neonatal-infantile seizuresGOF → early-onset epilepsy; may respond to Na+ channel blockers
Na+ (muscle)SCN4AHyperkalemic periodic paralysis; paramyotonia congenitaHyperKPP: K+-triggered attacks, myotonia; paramyotonia worsens with cold/exercise
Na+ (cardiac/muscle)SCN5ABrugada syndrome; hypokalemic periodic paralysis type 2 (rare)Cardiac arrhythmias + periodic paralysis overlap
K+KCNQ2Benign familial neonatal epilepsy (BFNE)Seizures day 2–7 of life; usually self-limited; M-current dysfunction
K+KCNA1Episodic ataxia type 1 (EA1)Brief ataxia attacks (seconds-minutes) + interictal myokymia; responds to carbamazepine
K+KCNJ2Andersen-Tawil syndrome (ATS / periodic paralysis type 3)Triad: periodic paralysis + cardiac arrhythmias (long QT) + dysmorphic features
Ca2+ (P/Q-type)CACNA1AEpisodic ataxia type 2 (EA2); familial hemiplegic migraine type 1 (FHM1); SCA6EA2: hours-long ataxia, responds to acetazolamide; same gene → 3 different phenotypes by mutation type
Ca2+ (L-type)CACNA1SHypokalemic periodic paralysis type 1Low-K+ triggered flaccid paralysis; most common periodic paralysis
Cl−CLCN1Myotonia congenita (Thomsen AD / Becker AR)Muscle stiffness without weakness; warm-up phenomenon; EMG → myotonic discharges
Ryanodine (RyR1)RYR1Malignant hyperthermia; central core diseaseTriggered by volatile anesthetics + succinylcholine; Rx = dantrolene
💎 Board Pearl
  • CACNA1A = one gene, three diseases: EA2 (LOF), FHM1 (GOF), SCA6 (trinucleotide repeat expansion)
  • Dravet (SCN1A LOF): AVOID Na+ channel blockers — they worsen seizures; use valproate, clobazam, stiripentol, fenfluramine
  • HyperKPP (SCN4A) = K+ triggers attacks + myotonia; HypoKPP (CACNA1S) = low K+ triggers attacks + NO myotonia
  • Acetazolamide works in: EA2, hypoKPP, and some hyperKPP — it does NOT work in EA1 (use carbamazepine)
Neuromuscular Junction
ComponentStructure/MechanismDisorderKey Features
Presynaptic — VGCC (P/Q-type)Ca2+ influx triggers ACh vesicle releaseLambert-Eaton myasthenic syndrome (LEMS)Anti-VGCC Ab; proximal weakness + areflexia + autonomic dysfunction; facilitation with exercise; RNS: ↓ CMAP + ↑increment >100% at high-rate
Presynaptic — ACh vesiclesVesicle docking/fusion (SNARE complex)BotulismClostridium botulinum toxin cleaves SNARE proteins; descending paralysis; dilated pupils; RNS similar to LEMS
Synaptic cleft — AChEDegrades ACh → choline + acetateOrganophosphate poisoningIrreversible AChE inhibition; cholinergic crisis (SLUDGE + nicotinic effects); Rx: atropine + pralidoxime
Postsynaptic — nAChRLigand-gated Na+/K+ channel on muscle endplateMyasthenia gravis (MG)Anti-AChR Ab (85%) or anti-MuSK Ab (5–8%); fatigable weakness; RNS: ↓decrement >10% at 2–3 Hz
Postsynaptic — MuSKOrganizes AChR clustering at endplateMuSK-MGBulbar-predominant; poor response to AChEIs; IgG4 (not complement-mediated)
Postsynaptic — agrin/LRP4Agrin → LRP4 → MuSK signaling cascadeCongenital myasthenic syndromes; anti-LRP4 MG (rare)CMS: genetic; onset childhood; no autoantibodies; treatment varies by subtype
💎 Board Pearl
  • Safety factor: Normally, ACh release far exceeds the threshold needed to trigger muscle AP — this “safety factor” is reduced in MG (fewer receptors) and LEMS (less ACh released)
  • MG: decrement on slow RNS (2–3 Hz); LEMS: increment on rapid RNS (20–50 Hz) or post-exercise facilitation
  • MuSK-MG is IgG4 → does NOT fix complement → no complement-mediated endplate destruction (unlike AChR-MG which is IgG1/IgG3)
  • Botulism vs LEMS: both presynaptic with facilitation; botulism = acute + descending + pupil involvement; LEMS = chronic + proximal + autonomic + associated with SCLC
EEG Frequencies
Frequency BandHz RangeNormal StatePathological Significance
Delta (δ)<4 HzDeep sleep (N3); normal in infantsFocal: structural lesion; diffuse: encephalopathy, increased ICP
Theta (θ)4–7 HzDrowsiness (N1); normal in children/adolescentsFocal: subcortical lesion; diffuse: mild encephalopathy
Alpha (α)8–13 HzRelaxed wakefulness, eyes closed, posterior dominant rhythmLoss/asymmetry: cortical dysfunction; alpha coma (poor prognosis post-anoxia)
Beta (β)13–30 HzActive thinking, anxiety; frontal predominanceExcess: benzodiazepines/barbiturates; focal: breach rhythm (skull defect)
Gamma (γ)>30 HzCognitive processing, sensory bindingRarely assessed clinically; may be seen with cortical activation
💎 Board Pearl
  • Alpha rhythm: posterior dominant, attenuates with eye opening (“Berger effect”) — if it does NOT attenuate, consider alpha coma
  • Diffuse beta = think benzodiazepines or barbiturates on board questions
  • Focal continuous delta in an adult = always think structural lesion until proven otherwise
EEG Patterns & Associations
PatternDescriptionClinical Association
FIRDA (frontal intermittent rhythmic delta)Bilateral, frontal, 2–3 Hz rhythmic deltaMetabolic/toxic encephalopathy; increased ICP; deep midline lesions
TIRDA (temporal intermittent rhythmic delta)Unilateral temporal rhythmic deltaStrongly associated with temporal lobe epilepsy
LPDs (lateralized periodic discharges) / PLEDsLateralized, periodic sharp waves/complexes at 1–2 HzAcute destructive lesion (stroke, herpes encephalitis, tumor); seizure risk ↑
GPDs (generalized periodic discharges)Bilaterally synchronous periodic dischargesAnoxic injury, CJD (1 Hz triphasic morphology), status epilepticus
Burst suppressionAlternating bursts of high-amplitude activity and suppression (<10 μV)Deep anesthesia/coma; severe anoxic injury; neonatal: Ohtahara syndrome
Triphasic wavesGeneralized, frontally-predominant, positive-negative-positive morphology with AP lagHepatic encephalopathy (“classic”); also uremic, other metabolic encephalopathies
GRDA (generalized rhythmic delta)Generalized, continuous/semi-continuous rhythmic deltaNon-specific; metabolic encephalopathy; may indicate non-convulsive status if evolving
Breach rhythmHigh-amplitude sharply contoured activity over skull defectPost-craniotomy; NOT epileptiform — do not overread as spikes
Wicket spikesArciform, 6–11 Hz, temporal, μ-shapedBenign normal variant; do NOT treat as epileptiform; seen in adults during drowsiness
14 & 6 Hz positive burstsPositive sharp transients at 14 or 6 Hz, posterior temporal, drowsinessBenign normal variant; no clinical significance; do NOT overread

Board Trap

  • Triphasic waves vs GPDs in CJD — morphology overlaps significantly; clinical context is essential (hepatic failure vs rapid dementia)
  • Breach rhythm is NOT epileptiform — do not mistake sharply contoured activity over a craniotomy site for spikes
  • TIRDA is the only intermittent rhythmic delta pattern that has a strong association with epilepsy; FIRDA does NOT indicate epilepsy
NCS/EMG Patterns
ParameterAxonal NeuropathyDemyelinating NeuropathyMyopathyPresynaptic NMJ (LEMS)Postsynaptic NMJ (MG)
CMAP amplitude↓ ReducedNormal or mildly ↓Normal or mildly ↓↓↓ Reduced (low baseline)Normal or mildly ↓
Conduction velocityNormal or mildly ↓↓↓ Slowed (<70–80% LLN)NormalNormalNormal
Distal latencyNormal↑ ProlongedNormalNormalNormal
F-wave latencyNormal or mildly ↑↑ Prolonged or absentNormalNormalNormal
Conduction blockAbsentPresent (hallmark)AbsentAbsentAbsent
Temporal dispersionAbsentPresentAbsentAbsentAbsent
Fibrillations/PSWsPresent (denervation)Present if secondary axonal lossPresent (active/inflammatory)AbsentAbsent
Motor unit morphologyLarge, polyphasic (reinnervation)Normal or largeSmall, short, polyphasicNormal (may vary)Normal (may vary)
RecruitmentReduced (neurogenic)Reduced (neurogenic)Early (myopathic)Normal to reducedNormal to reduced
RNS (2–3 Hz)N/AN/AN/ADecrement (low baseline CMAP)Decrement >10%
RNS (20–50 Hz) / post-exerciseN/AN/AN/AIncrement >100% (facilitation)No significant increment
💎 Board Pearl
  • Axonal = amplitude loss; Demyelinating = velocity slowing + conduction block — the single most tested NCS concept
  • Myopathy: small, short, polyphasic MUPs with early recruitment (full interference at low force) — opposite of neurogenic
  • Conduction block = >50% CMAP amplitude drop between proximal and distal stimulation without temporal dispersion — pathognomonic for demyelination
  • LEMS: low baseline CMAP → decrement at slow RNS → >100% increment at fast RNS or post-exercise — this triad is classic
CSF Analysis
ConditionOpening PressureWBC (cells/μL)Protein (mg/dL)Glucose (mg/dL)Special
Normal10–20 cm H2O<5 (lymphocytes)15–4550–80 (or >60% serum)Clear, colorless
Bacterial meningitis↑↑ (>25)1,000–10,000+ (PMNs)↑↑ (>100)↓↓ (<40)Positive Gram stain/culture; lactate ↑
Viral meningitisNormal or mildly ↑10–500 (lymphocytes)Normal or mildly ↑NormalPCR for HSV, enterovirus; early may show PMNs
TB/Fungal meningitis50–500 (lymphocytes)↑↑ (100–500)↓ (<40)TB: AFB smear, adenosine deaminase ↑; Fungal: India ink (crypto), antigen testing
GBSNormal<10 (albuminocytologic dissociation)↑↑ (>45, often >100)NormalHigh protein + normal WBC = albuminocytologic dissociation (classic)
MSNormal0–50 (lymphocytes)Normal or mildly ↑NormalOligoclonal bands (CSF-specific); ↑ IgG index; >50 WBC should question MS diagnosis
SAHRBCs (non-clearing across tubes)NormalXanthochromia (yellow supernatant after centrifugation) — appears >6–12 hrs
Carcinomatous meningitisLymphocytes + atypical cells↑↑Positive cytology (may need repeated LPs); flow cytometry for lymphoma
💎 Board Pearl
  • Albuminocytologic dissociation (high protein, normal WBC) = GBS until proven otherwise
  • CSF glucose <40 mg/dL (or <60% serum glucose) = bacterial, TB/fungal, or carcinomatous — NOT viral
  • MS: if WBC >50 or protein >100, strongly reconsider the diagnosis
  • SAH: xanthochromia distinguishes true SAH from traumatic tap — must centrifuge and examine supernatant
Sleep Stages
StageEEG PatternFeaturesClinical Relevance
WakefulnessAlpha (8–13 Hz) posteriorly; beta with eyes openPosterior dominant rhythm; attenuates with eye openingAbsence of alpha = cortical dysfunction or alpha coma
N1 (NREM Stage 1)Theta (4–7 Hz); vertex waves (V-waves)Lightest sleep; 5% of total sleep; slow rolling eye movementsVertex waves = sharply contoured central — normal variant, NOT epileptiform
N2 (NREM Stage 2)Sleep spindles (12–14 Hz) + K-complexes~50% of total sleep; thalamocortical circuits generate spindlesSpindles arise from thalamic reticular nucleus; K-complexes = largest normal EEG waveform
N3 (NREM Stage 3)Delta (<4 Hz, >75 μV); high-amplitude slow wavesDeep/slow-wave sleep; 15–20% of total; GH release peaksNREM parasomnias: sleepwalking, sleep terrors, confusional arousals (arise from N3)
REMLow-amplitude, mixed-frequency (resembles wakefulness); sawtooth wavesMuscle atonia; rapid eye movements; dreaming; 20–25% of totalREM behavior disorder (RBD): loss of atonia → dream enactment; strong predictor of synucleinopathy (PD/DLB/MSA)
💎 Board Pearl
  • Sleep spindles = thalamic reticular nucleus; K-complexes = vertex, biphasic, largest normal waveform
  • NREM parasomnias (N3): sleepwalking, night terrors, confusional arousals — vs REM parasomnias: RBD, nightmares
  • Narcolepsy type 1: hypocretin/orexin deficiency → direct REM entry (SOREMP); cataplexy is pathognomonic
  • RBD → synucleinopathy conversion rate >80% over 10–15 years (PD, DLB, MSA)
  • GH secretion peaks during N3 (slow-wave sleep); cortisol peaks in early morning
Nerve Fiber Types
TypeDiameter (μm)MyelinationFunctionConduction Velocity (m/s)
A-alpha (Ia, Ib)12–20Heavy myelinationProprioception (muscle spindle Ia, Golgi tendon Ib); motor to extrafusal muscle70–120
A-beta (II)5–12MyelinatedLight touch, pressure, vibration30–70
A-gamma3–6MyelinatedMotor to intrafusal muscle fibers (muscle spindle)15–30
A-delta (III)2–5Thinly myelinatedFast/sharp pain; temperature; first pain response12–30
B<3Lightly myelinatedPreganglionic autonomic fibers3–15
C (IV)0.4–1.2UnmyelinatedSlow/burning pain; temperature; postganglionic autonomic (sympathetic)0.5–2
💎 Board Pearl
  • Conduction velocity is proportional to fiber diameter — largest/most myelinated fibers conduct fastest
  • A-delta = first (sharp) pain; C fibers = second (burning/aching) pain — classic double pain response
  • Small fiber neuropathy (A-delta + C fibers) = burning pain + autonomic dysfunction; NCS is NORMAL (too small to measure); diagnose by skin biopsy (IENFD)
  • Large fiber neuropathy (A-alpha/beta) = loss of proprioception/vibration + areflexia; NCS abnormal
Must-Know Numbers

Membrane & Ion Physiology

ParameterValueNotes
Resting membrane potential−70 mV (neurons); −90 mV (skeletal muscle)Determined mainly by K+ leak channels; closest to EK
Na+ equilibrium potential (ENa)+60 mVNa+ intracellular ~15 mM; extracellular ~145 mM
K+ equilibrium potential (EK)−90 mVK+ intracellular ~140 mM; extracellular ~4 mM
Ca2+ equilibrium potential+120 mVIntracellular ~0.0001 mM; extracellular ~2 mM
Action potential threshold−55 mVVoltage-gated Na+ channels open; all-or-none response
Na+/K+ ATPase ratio3 Na+ out : 2 K+ inElectrogenic pump; contributes −3 to −5 mV to resting potential

Normal NCS Values (Upper Limb Reference)

ParameterNormal ValueNotes
Motor conduction velocity>50 m/s (upper limb); >40 m/s (lower limb)Slowing <70–80% LLN = demyelinating
CMAP amplitudeVaries by nerve; typically >4–6 mVReduced in axonal neuropathy or NMJ disorder
SNAP amplitudeVaries; typically >10–20 μVNormal SNAPs + abnormal CMAPs = preganglionic lesion or NMJ disorder
Distal motor latency (median)<4.4 msProlonged in carpal tunnel syndrome
F-wave latency (upper limb)<32 msTests proximal segments; prolonged in GBS, radiculopathy

Normal CSF Values

ParameterNormal Value
Opening pressure10–20 cm H2O (up to 25 in obese)
WBC count<5 cells/μL (all lymphocytes/monocytes)
Protein15–45 mg/dL
Glucose50–80 mg/dL (or >60% serum glucose)
Volume (adult)~150 mL total; ~500 mL produced/day
IgG index<0.7
💎 Board Pearl
  • Resting potential is closest to EK (−90 mV) because resting membrane is most permeable to K+
  • Normal SNAPs + abnormal CMAPs → think preganglionic lesion (radiculopathy, motor neuron disease) or NMJ disorder — dorsal root ganglion intact preserves SNAPs
  • CSF protein rises ~1 mg/dL per 1,000 RBCs in traumatic tap
  • IIH (pseudotumor cerebri): elevated OP (>25 cm H2O) with NORMAL CSF composition
Classic Board Traps

Board Traps — Do Not Get Caught

  • Dravet + lamotrigine: SCN1A LOF → Na+ channel blockers WORSEN seizures; if a child with febrile seizures progressing to epilepsy gets worse on lamotrigine → think Dravet
  • Small fiber neuropathy + normal NCS: NCS only measures large myelinated fibers; small fiber neuropathy (burning pain, autonomic sx) needs skin biopsy (intraepidermal nerve fiber density)
  • Breach rhythm ≠ epileptiform: Sharply contoured beta/alpha over craniotomy site is breach rhythm — a normal finding, not spikes
  • Wicket spikes ≠ temporal spikes: Benign variant in drowsy adults; arciform, temporal, monophasic — no treatment needed
  • MG + aminoglycosides: Aminoglycosides block presynaptic Ca2+ channels and postsynaptic AChR — can precipitate myasthenic crisis
  • Succinylcholine + hyperkalemia: Depolarizing blocker → K+ release; CONTRAINDICATED in burns, denervation, upper motor neuron lesions, crush injury → risk of fatal hyperkalemia
  • LEMS vs MG on RNS: Both show decrement at slow RNS; LEMS shows >100% increment at fast RNS or post-exercise — MG does NOT
  • Triphasic waves vs NCSE: Triphasic waves (hepatic/metabolic) vs nonconvulsive status epilepticus — look for anterior-posterior lag (triphasic) and clinical context; trial of benzodiazepine may clarify
  • GBS + normal NCS early: NCS may be normal in the first 1–2 weeks of GBS; F-wave prolongation/absence may be the earliest finding
  • Anti-MuSK MG + pyridostigmine: MuSK-MG often worsens with AChE inhibitors; first-line is immunotherapy (rituximab, PLEX)
  • Alpha coma: Unreactive, diffuse alpha in a comatose patient post-cardiac arrest = poor prognosis; do NOT confuse with normal wakefulness alpha
  • RBD → synucleinopathy: Isolated RBD precedes PD/DLB/MSA by years-decades; conversion rate >80% — essential prognostic counseling point